Plateforme MGX

Publications IGF

• Salles J, Eddiry S, Amri S, Galindo M, Lacassagne E, George S, Mialhe X, Lhuillier É, Franchitto N, Jeanneteau F, Gennero I, Salles JP, Tauber M. Differential DNA methylation in iPSC-derived dopaminergic neurons: a step forward on the role of SNORD116 microdeletion in the pathophysiology of addictive behavior in Prader-Willi syndrome. Mol Psychiatry. 2024 Apr 2. doi: 10.1038/s41380-024-02542-4.
• Puighermanal E, Castell L, Esteve-Codina A, Melser S, Kaganovsky K, Zussy C, Boubaker-Vitre J, Gut M, Rialle S, Kellendonk C, Sanz E, Quintana A, Marsicano G, Martin M, Rubinstein M, Girault JA, Ding JB, Valjent E. Functional and molecular heterogeneity of D2R neurons along dorsal ventral axis in the striatum. Nat Commun. 11:1957. doi: 10.1038/s41467-020-15716-9.
• Reynès C, Kister G, Rohmer M, Bouschet T, Varrault A, Dubois E, Rialle S, Journot L, Sabatier R. ISoLDE: a data-driven statistical method for the inference of allelic imbalance in datasets with reciprocal crosses. Bioinformatics. 2020, 36:504-513 doi: 10.1093/bioinformatics/btz564
• Baudement MO, Cournac A, Court F, Seveno M, Parrinello H, Reynes C, Sabatier R, Bouschet T, Yi Z, Sallis S, Tancelin M, Rebouissou C, Cathala G, Lesne A, Mozziconacci J, Journot L, Forné T. High-salt-recovered sequences are associated with the active chromosomal compartment and with large ribonucleoprotein complexes including nuclear bodies. Genome Res. 2020, 28:1733-46

Publications extérieures à l’IGF

• Leiba J, Sipka T, Begon-Pescia C, Bernardello M, Tairi S, Bossi L, Gonzalez AA, Mialhe X, Gualda E, Loza-Alvarez P, Blanc-Potard A, Lutfalla G, Nguyen-Chi ME (2024) Dynamics of macrophage polarization support Salmonella persistence in a whole living organism. Elife. 13:e89828. doi: 10.7554/eLife.89828. PMID: 38224094.
• Kuhl H, Euclide PT, Klopp C, Cabau C, Zahm M, Lopez-Roques C, Iampietro C, Kuchly C, Donnadieu C, Feron R, Parrinello H, Poncet C, Jaffrelo L, Confolent C, Wen M, Herpin A, Jouanno E, Bestin A, Haffray P, Morvezen R, de Almeida TR, Lecocq T, Schaerlinger B, Chardard D, Żarski D, Larson WA, Postlethwait JH, Timirkhanov S, Kloas W, Wuertz S, Stöck M, Guiguen Y. Multi-genome comparisons reveal gain-and-loss evolution of anti-Mullerian hormone receptor type 2 as a candidate master sex-determining gene in Percidae. BMC Bio 2024 Jun 26;22(1):141. doi: 10.1186/s12915-024-01935-9. PMID: 38926709
• Esnault C, Magat T, Zine El Aabidine A, Garcia-Oliver E, Cucchiarini A, Bouchouika S, Lleres D, Goerke L, Luo Y, Verga D, Lacroix L, Feil R, Spicuglia S, Mergny JL, Andrau JC (2023) G4access identifies G-quadruplexes and their associations with open chromatin and imprinting control regions. Nat Genet. 55:1359-69. doi: 10.1038/s41588-023-01437-4.
• Boulanger M, Aqrouq M, Tempé  D, Kifagi  C, Ristic  M, Akl  D, Hallal  R, Carusi  A, Gabellier  L, de Toledo  M, Sigurdsson  J-O, Kaoma T, Andrieu-Soler  C, Forné  T, Soler  E, Hicheri  Y, Gueret  E, Vallar  L, Olsen  JV, Cartron  G, Piechaczyk  M, Bossis G. DeSUMOylation of chromatin-bound proteins limits the rapid transcriptional reprogramming induced by daunorubicin in acute myeloid leukemias. Nucleic Acids Res. 2023, 51:8413-33. doi: 10.1093/nar/gkad581.
• Jay P, Chouteau M, Whibley A, Bastide H, Parrinello H, Llaurens V, Joron M. Mutation load at a mimicry supergene sheds new light on the evolution of inversion polymorphisms. Nat Genet. 2021, 53:288-293 doi: 10.1038/s41588-020-00771-1.
• Du K, Stöck M, Kneitz S, Klopp C, Woltering JM, Adolfi MC, Feron R, Prokopov D, Makunin A, Kichigin I, Schmidt C, Fischer P, Kuhl H, Wuertz S, Gessner J, Kloas W, Cabau C, Iampietro C, Parrinello H, Tomlinson C, Journot L, Postlethwait JH, Braasch I, Trifonov V, Warren WC, Meyer A, Guiguen Y, Schartl M. The sterlet sturgeon genome sequence and the mechanisms of segmental rediploidization. Nat Ecol Evol. 2020 Jun;4(6):841-852. doi: 10.1038/s41559-020-1166-x. PMID: 32231327